pycroglia

User Guide

  • Getting Started
    • Requirements
    • Installation
      • Option 1 — Pre-built executables
      • Option 2 — uvx (recommended for end-users)
      • Option 3 — pip
      • Option 4 — From source
    • Launching the GUI
    • Library Mode
    • Next Steps
  • Workflow and UI Guide
    • 1. File Selection
    • 2. Filter Editor
    • 3. Segmentation Editor
    • 4. Cell Selection
    • 5. Results Dashboard
  • System Architecture
    • Core Module (pycroglia.core)
      • Compute Infrastructure
      • Metrics DAG
      • Algorithm Highlights
    • UI Module (pycroglia.ui)
  • Project
    • Issue association
    • Creating Issues
    • Branch naming conventions
    • Commit Message Guidelines
      • Examples
    • Pull request guidelines
  • Python
    • Docstrings
    • Linter and formatter

API Reference

  • pycroglia
    • pycroglia package
      • Subpackages
      • Module contents
pycroglia
  • Search

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